Impacts of Molecular Structure on Nucleic Acid-Protein Interactions

Interactions between nucleic acids and proteins are essential requirements for the viability of cellular life because they are indispensable for many basic biological processes. DNA is typically presented as a specific double-stranded helical structure, but nucleic acids have great structural flexib...

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collection Directory of Open Access Books
description Interactions between nucleic acids and proteins are essential requirements for the viability of cellular life because they are indispensable for many basic biological processes. DNA is typically presented as a specific double-stranded helical structure, but nucleic acids have great structural flexibility. Current knowledge demonstrates that the structural conformations of nucleic acids play critical roles in protein–DNA interactions. This book presents a collection of research findings published in the Special Issue of the International Journal of Molecular Sciences, titled “Impacts of Molecular Structure on Nucleic Acid-Protein Interactions”.The breadth of research findings reported here demonstrates that the structural flexibility of nucleic acids plays critical roles in their interactions with proteins, with important implications across a range of human diseases, including cancer and some infectious diseases.Prof. Richard BowaterUniversity of East Anglia, Norwich, United KingdomProf. Václav BrázdaInstitute of Biophysics of the Czech Academy of Sciences, Brno, Czech Republic
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institution Directory of Open Access Books
language eng
publishDate 2023
publishDateRange 2023
publishDateSort 2023
publisher MDPI - Multidisciplinary Digital Publishing Institute
publisherStr MDPI - Multidisciplinary Digital Publishing Institute
record_format ojs
spelling doab-20.500.12854ir-1000912024-04-11T15:11:13Z Impacts of Molecular Structure on Nucleic Acid-Protein Interactions Brazda, Vaclav Bowater, Richard DNA RNA protein binding G-quadruplex triplex i-motif Z-DNA Z-RNA cruciform amino acid composition COVID-19 SARS-CoV-2 coronavirus CNBP virus bioinformatics coevolution host dsDNA G4Hunter evolution plant science nucleic acids circular dichroism UV light ligand rhodamine thiazole orange thioflavin T p53 aging longevity comparative analysis protein sequence Drosophila polytene chromosomes Canton-S agnostic ectopic pairing 1.688 repeats 372-bp repeats fragile X-associated primary ovarian insufficiency (FXPOI) fragile X-associated tremor/ataxia syndrome (FXTAS) fragile X syndrome (FXS) repeat instability repeat expansion chromosome fragility RNA gain-of-function repeat-associated non-AUG (RAN) translation repeat-mediated gene silencing Zα domain orthogonal representation algorithm toehold switch arithmetic operation RNA–RNA interaction molecular computing reversible computing DNA base sequence DNA structure DNA supercoiling epigenetics genome stability inverted repeat replication transcription nucleic acid–protein interactions thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TB Technology: general issues thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TC Biochemical engineering::TCB Biotechnology Interactions between nucleic acids and proteins are essential requirements for the viability of cellular life because they are indispensable for many basic biological processes. DNA is typically presented as a specific double-stranded helical structure, but nucleic acids have great structural flexibility. Current knowledge demonstrates that the structural conformations of nucleic acids play critical roles in protein–DNA interactions. This book presents a collection of research findings published in the Special Issue of the International Journal of Molecular Sciences, titled “Impacts of Molecular Structure on Nucleic Acid-Protein Interactions”.The breadth of research findings reported here demonstrates that the structural flexibility of nucleic acids plays critical roles in their interactions with proteins, with important implications across a range of human diseases, including cancer and some infectious diseases.Prof. Richard BowaterUniversity of East Anglia, Norwich, United KingdomProf. Václav BrázdaInstitute of Biophysics of the Czech Academy of Sciences, Brno, Czech Republic 2023-05-11T17:20:24Z 2023-05-11T17:20:24Z 2023 book ONIX_20230511_9783036574455_108 9783036574455 9783036574448 https://directory.doabooks.org/handle/20.500.12854/100091 eng image/jpeg Attribution 4.0 International https://mdpi.com/books/pdfview/book/7184 https://mdpi.com/books/pdfview/book/7184 MDPI - Multidisciplinary Digital Publishing Institute 10.3390/books978-3-0365-7444-8 10.3390/books978-3-0365-7444-8 46cabcaa-dd94-4bfe-87b4-55023c1b36d0 9783036574455 9783036574448 216 Basel open access
spellingShingle DNA
RNA
protein binding
G-quadruplex
triplex
i-motif
Z-DNA
Z-RNA
cruciform
amino acid composition
COVID-19
SARS-CoV-2
coronavirus
CNBP
virus
bioinformatics
coevolution
host
dsDNA
G4Hunter
evolution
plant science
nucleic acids
circular dichroism
UV light
ligand
rhodamine
thiazole orange
thioflavin T
p53
aging
longevity
comparative analysis
protein sequence
Drosophila
polytene chromosomes
Canton-S
agnostic
ectopic pairing
1.688 repeats
372-bp repeats
fragile X-associated primary ovarian insufficiency (FXPOI)
fragile X-associated tremor/ataxia syndrome (FXTAS)
fragile X syndrome (FXS)
repeat instability
repeat expansion
chromosome fragility
RNA gain-of-function
repeat-associated non-AUG (RAN) translation
repeat-mediated gene silencing
Zα domain
orthogonal representation
algorithm
toehold switch
arithmetic operation
RNA–RNA interaction
molecular computing
reversible computing
DNA base sequence
DNA structure
DNA supercoiling
epigenetics
genome stability
inverted repeat
replication
transcription
nucleic acid–protein interactions
thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TB Technology: general issues
thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TC Biochemical engineering::TCB Biotechnology
Impacts of Molecular Structure on Nucleic Acid-Protein Interactions
title Impacts of Molecular Structure on Nucleic Acid-Protein Interactions
title_full Impacts of Molecular Structure on Nucleic Acid-Protein Interactions
title_fullStr Impacts of Molecular Structure on Nucleic Acid-Protein Interactions
title_full_unstemmed Impacts of Molecular Structure on Nucleic Acid-Protein Interactions
title_short Impacts of Molecular Structure on Nucleic Acid-Protein Interactions
title_sort impacts of molecular structure on nucleic acid protein interactions
topic DNA
RNA
protein binding
G-quadruplex
triplex
i-motif
Z-DNA
Z-RNA
cruciform
amino acid composition
COVID-19
SARS-CoV-2
coronavirus
CNBP
virus
bioinformatics
coevolution
host
dsDNA
G4Hunter
evolution
plant science
nucleic acids
circular dichroism
UV light
ligand
rhodamine
thiazole orange
thioflavin T
p53
aging
longevity
comparative analysis
protein sequence
Drosophila
polytene chromosomes
Canton-S
agnostic
ectopic pairing
1.688 repeats
372-bp repeats
fragile X-associated primary ovarian insufficiency (FXPOI)
fragile X-associated tremor/ataxia syndrome (FXTAS)
fragile X syndrome (FXS)
repeat instability
repeat expansion
chromosome fragility
RNA gain-of-function
repeat-associated non-AUG (RAN) translation
repeat-mediated gene silencing
Zα domain
orthogonal representation
algorithm
toehold switch
arithmetic operation
RNA–RNA interaction
molecular computing
reversible computing
DNA base sequence
DNA structure
DNA supercoiling
epigenetics
genome stability
inverted repeat
replication
transcription
nucleic acid–protein interactions
thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TB Technology: general issues
thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TC Biochemical engineering::TCB Biotechnology
topic_facet DNA
RNA
protein binding
G-quadruplex
triplex
i-motif
Z-DNA
Z-RNA
cruciform
amino acid composition
COVID-19
SARS-CoV-2
coronavirus
CNBP
virus
bioinformatics
coevolution
host
dsDNA
G4Hunter
evolution
plant science
nucleic acids
circular dichroism
UV light
ligand
rhodamine
thiazole orange
thioflavin T
p53
aging
longevity
comparative analysis
protein sequence
Drosophila
polytene chromosomes
Canton-S
agnostic
ectopic pairing
1.688 repeats
372-bp repeats
fragile X-associated primary ovarian insufficiency (FXPOI)
fragile X-associated tremor/ataxia syndrome (FXTAS)
fragile X syndrome (FXS)
repeat instability
repeat expansion
chromosome fragility
RNA gain-of-function
repeat-associated non-AUG (RAN) translation
repeat-mediated gene silencing
Zα domain
orthogonal representation
algorithm
toehold switch
arithmetic operation
RNA–RNA interaction
molecular computing
reversible computing
DNA base sequence
DNA structure
DNA supercoiling
epigenetics
genome stability
inverted repeat
replication
transcription
nucleic acid–protein interactions
thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TB Technology: general issues
thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TC Biochemical engineering::TCB Biotechnology
url ONIX_20230511_9783036574455_108