Bioimage Data Analysis Workflows

This Open Access textbook provides students and researchers in the life sciences with essential practical information on how to quantitatively analyze data images. It refrains from focusing on theory, and instead uses practical examples and step-by step protocols to familiarize readers with the most...

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Γλώσσα:Αγγλικά
Έκδοση: Springer Nature 2021
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collection Directory of Open Access Books
description This Open Access textbook provides students and researchers in the life sciences with essential practical information on how to quantitatively analyze data images. It refrains from focusing on theory, and instead uses practical examples and step-by step protocols to familiarize readers with the most commonly used image processing and analysis platforms such as ImageJ, MatLab and Python. Besides gaining knowhow on algorithm usage, readers will learn how to create an analysis pipeline by scripting language; these skills are important in order to document reproducible image analysis workflows. The textbook is chiefly intended for advanced undergraduates in the life sciences and biomedicine without a theoretical background in data analysis, as well as for postdocs, staff scientists and faculty members who need to perform regular quantitative analyses of microscopy images.
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institution Directory of Open Access Books
language eng
publishDate 2021
publishDateRange 2021
publishDateSort 2021
publisher Springer Nature
publisherStr Springer Nature
record_format ojs
spelling doab-20.500.12854ir-346282025-03-12T00:03:50Z Bioimage Data Analysis Workflows Miura, Kota Sladoje, Nataša Medicine Biomedical engineering Cell biology Bioinformatics Biology—Technique Systems biology Biological systems Textbook thema EDItEUR::M Medicine and Nursing::MQ Nursing and ancillary services::MQW Biomedical engineering thema EDItEUR::P Mathematics and Science::PS Biology, life sciences thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSA Life sciences: general issues thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSF Cellular biology (cytology) This Open Access textbook provides students and researchers in the life sciences with essential practical information on how to quantitatively analyze data images. It refrains from focusing on theory, and instead uses practical examples and step-by step protocols to familiarize readers with the most commonly used image processing and analysis platforms such as ImageJ, MatLab and Python. Besides gaining knowhow on algorithm usage, readers will learn how to create an analysis pipeline by scripting language; these skills are important in order to document reproducible image analysis workflows. The textbook is chiefly intended for advanced undergraduates in the life sciences and biomedicine without a theoretical background in data analysis, as well as for postdocs, staff scientists and faculty members who need to perform regular quantitative analyses of microscopy images. 2021-02-10T14:18:58Z 2021-02-10T14:18:58Z 2020-03-18 13:36:15 2020-04-01T09:00:33Z 2020 book 1007135 OCN: 1124957676 http://library.oapen.org/handle/20.500.12657/23026 https://directory.doabooks.org/handle/20.500.12854/34628 eng Learning Materials in Biosciences open access image/jpeg image/jpeg image/jpeg image/jpeg n/a n/a n/a n/a https://library.oapen.org/bitstream/20.500.12657/23026/1/1007135.pdf https://library.oapen.org/bitstream/20.500.12657/23026/1/1007135.pdf https://library.oapen.org/bitstream/20.500.12657/23026/1/1007135.pdf https://library.oapen.org/bitstream/20.500.12657/23026/1/1007135.pdf Springer Nature 10.1007/978-3-030-22386-1 10.1007/978-3-030-22386-1 9fa3421d-f917-4153-b9ab-fc337c396b5a 170 Cham open access
spellingShingle Medicine
Biomedical engineering
Cell biology
Bioinformatics
Biology—Technique
Systems biology
Biological systems
Textbook
thema EDItEUR::M Medicine and Nursing::MQ Nursing and ancillary services::MQW Biomedical engineering
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSA Life sciences: general issues
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSF Cellular biology (cytology)
Bioimage Data Analysis Workflows
title Bioimage Data Analysis Workflows
title_full Bioimage Data Analysis Workflows
title_fullStr Bioimage Data Analysis Workflows
title_full_unstemmed Bioimage Data Analysis Workflows
title_short Bioimage Data Analysis Workflows
title_sort bioimage data analysis workflows
topic Medicine
Biomedical engineering
Cell biology
Bioinformatics
Biology—Technique
Systems biology
Biological systems
Textbook
thema EDItEUR::M Medicine and Nursing::MQ Nursing and ancillary services::MQW Biomedical engineering
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSA Life sciences: general issues
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSF Cellular biology (cytology)
topic_facet Medicine
Biomedical engineering
Cell biology
Bioinformatics
Biology—Technique
Systems biology
Biological systems
Textbook
thema EDItEUR::M Medicine and Nursing::MQ Nursing and ancillary services::MQW Biomedical engineering
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSA Life sciences: general issues
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSF Cellular biology (cytology)
url 1007135