Methods in Computational Biology

Modern biology is rapidly becoming a study of large sets of data. Understanding these data sets is a major challenge for most life sciences, including the medical, environmental, and bioprocess fields. Computational biology approaches are essential for leveraging this ongoing revolution in omics dat...

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Үндсэн зохиолчид: Carlson, Ross, Sauro, Herbert
Формат: Online
Хэл сонгох:англи
Хэвлэсэн: MDPI - Multidisciplinary Digital Publishing Institute 2021
Нөхцлүүд:
Онлайн хандалт:35889
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author Carlson, Ross
Sauro, Herbert
author_browse Carlson, Ross
Sauro, Herbert
author_facet Carlson, Ross
Sauro, Herbert
author_sort Carlson, Ross
collection Directory of Open Access Books
description Modern biology is rapidly becoming a study of large sets of data. Understanding these data sets is a major challenge for most life sciences, including the medical, environmental, and bioprocess fields. Computational biology approaches are essential for leveraging this ongoing revolution in omics data. A primary goal of this Special Issue, entitled “Methods in Computational Biology”, is the communication of computational biology methods, which can extract biological design principles from complex data sets, described in enough detail to permit the reproduction of the results. This issue integrates interdisciplinary researchers such as biologists, computer scientists, engineers, and mathematicians to advance biological systems analysis. The Special Issue contains the following sections:•Reviews of Computational Methods•Computational Analysis of Biological Dynamics: From Molecular to Cellular to Tissue/Consortia Levels•The Interface of Biotic and Abiotic Processes•Processing of Large Data Sets for Enhanced Analysis•Parameter Optimization and Measurement
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institution Directory of Open Access Books
language eng
publishDate 2021
publishDateRange 2021
publishDateSort 2021
publisher MDPI - Multidisciplinary Digital Publishing Institute
publisherStr MDPI - Multidisciplinary Digital Publishing Institute
record_format ojs
spelling doab-20.500.12854ir-533222024-03-30T12:51:01Z Methods in Computational Biology Carlson, Ross Sauro, Herbert T58.5-58.64 n/a inosine immune checkpoint inhibitor geometric singular perturbation theory simulation BioModels Database ADAR calcium current bifurcation analysis bacterial biofilms nonlinear dynamics explanatory model turning point bifurcation oscillator workflow bioreactor integrated modeling modeling methods elementary flux modes visualization multiscale systems biology evolutionary algorithm metabolic model differential evolution reduced-order model computational model gut microbiota dysbiosis canard-induced EADs computational biology metabolic modelling methods SREBP-2 mechanistic model systems modeling biological networks macromolecular composition provenance flux balance analysis immunotherapy compartmental modeling immuno-oncology metabolic network visualization mechanism bistable switch Clostridium difficile infection bioreactor operation optimization microRNA targeting CFD simulation biomass reaction RNA editing ordinary differential equation metabolic modeling mass-action networks hybrid model multiple time scales quantitative systems pharmacology (QSP) mathematical modeling microRNA cancer parameter optimization Hopf bifurcation breast thema EDItEUR::K Economics, Finance, Business and Management::KN Industry and industrial studies::KNT Media, entertainment, information and communication industries::KNTX Information technology industries Modern biology is rapidly becoming a study of large sets of data. Understanding these data sets is a major challenge for most life sciences, including the medical, environmental, and bioprocess fields. Computational biology approaches are essential for leveraging this ongoing revolution in omics data. A primary goal of this Special Issue, entitled “Methods in Computational Biology”, is the communication of computational biology methods, which can extract biological design principles from complex data sets, described in enough detail to permit the reproduction of the results. This issue integrates interdisciplinary researchers such as biologists, computer scientists, engineers, and mathematicians to advance biological systems analysis. The Special Issue contains the following sections:•Reviews of Computational Methods•Computational Analysis of Biological Dynamics: From Molecular to Cellular to Tissue/Consortia Levels•The Interface of Biotic and Abiotic Processes•Processing of Large Data Sets for Enhanced Analysis•Parameter Optimization and Measurement 2021-02-11T19:26:58Z 2021-02-11T19:26:58Z 2019-08-28 11:21:27 2019 book 35889 9783039211630 9783039211647 https://directory.doabooks.org/handle/20.500.12854/53322 eng image/jpeg Attribution-NonCommercial-NoDerivatives 4.0 International https://mdpi.com/books/pdfview/book/1403 MDPI - Multidisciplinary Digital Publishing Institute 10.3390/books978-3-03921-164-7 10.3390/books978-3-03921-164-7 46cabcaa-dd94-4bfe-87b4-55023c1b36d0 9783039211630 9783039211647 214 open access
spellingShingle T58.5-58.64
n/a
inosine
immune checkpoint inhibitor
geometric singular perturbation theory
simulation
BioModels Database
ADAR
calcium current
bifurcation analysis
bacterial biofilms
nonlinear dynamics
explanatory model
turning point bifurcation
oscillator
workflow
bioreactor integrated modeling
modeling methods
elementary flux modes visualization
multiscale systems biology
evolutionary algorithm
metabolic model
differential evolution
reduced-order model
computational model
gut microbiota dysbiosis
canard-induced EADs
computational biology
metabolic modelling
methods
SREBP-2
mechanistic model
systems modeling
biological networks
macromolecular composition
provenance
flux balance analysis
immunotherapy
compartmental modeling
immuno-oncology
metabolic network visualization
mechanism
bistable switch
Clostridium difficile infection
bioreactor operation optimization
microRNA targeting
CFD simulation
biomass reaction
RNA editing
ordinary differential equation
metabolic modeling
mass-action networks
hybrid model
multiple time scales
quantitative systems pharmacology (QSP)
mathematical modeling
microRNA
cancer
parameter optimization
Hopf bifurcation
breast
thema EDItEUR::K Economics, Finance, Business and Management::KN Industry and industrial studies::KNT Media, entertainment, information and communication industries::KNTX Information technology industries
Carlson, Ross
Sauro, Herbert
Methods in Computational Biology
title Methods in Computational Biology
title_full Methods in Computational Biology
title_fullStr Methods in Computational Biology
title_full_unstemmed Methods in Computational Biology
title_short Methods in Computational Biology
title_sort methods in computational biology
topic T58.5-58.64
n/a
inosine
immune checkpoint inhibitor
geometric singular perturbation theory
simulation
BioModels Database
ADAR
calcium current
bifurcation analysis
bacterial biofilms
nonlinear dynamics
explanatory model
turning point bifurcation
oscillator
workflow
bioreactor integrated modeling
modeling methods
elementary flux modes visualization
multiscale systems biology
evolutionary algorithm
metabolic model
differential evolution
reduced-order model
computational model
gut microbiota dysbiosis
canard-induced EADs
computational biology
metabolic modelling
methods
SREBP-2
mechanistic model
systems modeling
biological networks
macromolecular composition
provenance
flux balance analysis
immunotherapy
compartmental modeling
immuno-oncology
metabolic network visualization
mechanism
bistable switch
Clostridium difficile infection
bioreactor operation optimization
microRNA targeting
CFD simulation
biomass reaction
RNA editing
ordinary differential equation
metabolic modeling
mass-action networks
hybrid model
multiple time scales
quantitative systems pharmacology (QSP)
mathematical modeling
microRNA
cancer
parameter optimization
Hopf bifurcation
breast
thema EDItEUR::K Economics, Finance, Business and Management::KN Industry and industrial studies::KNT Media, entertainment, information and communication industries::KNTX Information technology industries
topic_facet T58.5-58.64
n/a
inosine
immune checkpoint inhibitor
geometric singular perturbation theory
simulation
BioModels Database
ADAR
calcium current
bifurcation analysis
bacterial biofilms
nonlinear dynamics
explanatory model
turning point bifurcation
oscillator
workflow
bioreactor integrated modeling
modeling methods
elementary flux modes visualization
multiscale systems biology
evolutionary algorithm
metabolic model
differential evolution
reduced-order model
computational model
gut microbiota dysbiosis
canard-induced EADs
computational biology
metabolic modelling
methods
SREBP-2
mechanistic model
systems modeling
biological networks
macromolecular composition
provenance
flux balance analysis
immunotherapy
compartmental modeling
immuno-oncology
metabolic network visualization
mechanism
bistable switch
Clostridium difficile infection
bioreactor operation optimization
microRNA targeting
CFD simulation
biomass reaction
RNA editing
ordinary differential equation
metabolic modeling
mass-action networks
hybrid model
multiple time scales
quantitative systems pharmacology (QSP)
mathematical modeling
microRNA
cancer
parameter optimization
Hopf bifurcation
breast
thema EDItEUR::K Economics, Finance, Business and Management::KN Industry and industrial studies::KNT Media, entertainment, information and communication industries::KNTX Information technology industries
url 35889
work_keys_str_mv AT carlsonross methodsincomputationalbiology
AT sauroherbert methodsincomputationalbiology