Optical Approaches to Capture Plant Dynamics in Time, Space, and Across Scales

Quantifying temporal changes in plant geometry as a result of genetic, developmental, or environmental causes is essential to improve our understanding of the structure and function relationships in plants. Over the last decades, optical imaging and remote sensing developed fundamental working tools...

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Автори: Alexander Bucksch, Norbert Pfeifer, Eetu Puttonen, András Zlinszky
Формат: Online
Мова:Англійська
Опубліковано: Frontiers Media SA 2021
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Онлайн доступ:31953
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author Alexander Bucksch
Norbert Pfeifer
Eetu Puttonen
András Zlinszky
author_browse Alexander Bucksch
András Zlinszky
Eetu Puttonen
Norbert Pfeifer
author_facet Alexander Bucksch
Norbert Pfeifer
Eetu Puttonen
András Zlinszky
author_sort Alexander Bucksch
collection Directory of Open Access Books
description Quantifying temporal changes in plant geometry as a result of genetic, developmental, or environmental causes is essential to improve our understanding of the structure and function relationships in plants. Over the last decades, optical imaging and remote sensing developed fundamental working tools to monitor and quantify our environment and plants in particular. Increased efficiency of methods lowered the barrier to compare, integrate, and interpret the optically obtained plant data across larger spatial scales and across scales of biological organization. In particular, acquisition speed at high resolutions reached levels that allow capturing the temporal dynamics in plants in three dimensions along with multi-spectral information beyond human visual senses. These advanced imaging capabilities have proven to be essential to detect and focus on analyzing temporal dynamics of plant geometries. The focus of this Research Topic is on optical techniques developed to study geometrical changes at the plant level detected within the wavelength spectrum between near-UV to near infrared. Such techniques typically involve photogrammetric, LiDAR, or imaging spectroscopy approaches but are not exclusively restricted to these. Instruments operating within this range of wavelengths allow capturing a wide range of temporal scales ranging from sub-second to seasonal changes that result from plant development, environmental effects like wind and heat, or genetically controlled adaption to environmental conditions. The Research Topic covered a plethora of methodological approaches as suggestions for best practices in the light of a particular research question and to a wider view to different research disciplines and how they utilize their state-of-the-art techniques in demonstrating potential use cases across different scales.
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spelling doab-20.500.12854ir-552962024-04-05T17:31:19Z Optical Approaches to Capture Plant Dynamics in Time, Space, and Across Scales Alexander Bucksch Norbert Pfeifer Eetu Puttonen András Zlinszky QK1-989 Q1-390 computational plant science plant dynamics photogrammetry phenotyping temporal imaging thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PST Botany and plant sciences Quantifying temporal changes in plant geometry as a result of genetic, developmental, or environmental causes is essential to improve our understanding of the structure and function relationships in plants. Over the last decades, optical imaging and remote sensing developed fundamental working tools to monitor and quantify our environment and plants in particular. Increased efficiency of methods lowered the barrier to compare, integrate, and interpret the optically obtained plant data across larger spatial scales and across scales of biological organization. In particular, acquisition speed at high resolutions reached levels that allow capturing the temporal dynamics in plants in three dimensions along with multi-spectral information beyond human visual senses. These advanced imaging capabilities have proven to be essential to detect and focus on analyzing temporal dynamics of plant geometries. The focus of this Research Topic is on optical techniques developed to study geometrical changes at the plant level detected within the wavelength spectrum between near-UV to near infrared. Such techniques typically involve photogrammetric, LiDAR, or imaging spectroscopy approaches but are not exclusively restricted to these. Instruments operating within this range of wavelengths allow capturing a wide range of temporal scales ranging from sub-second to seasonal changes that result from plant development, environmental effects like wind and heat, or genetically controlled adaption to environmental conditions. The Research Topic covered a plethora of methodological approaches as suggestions for best practices in the light of a particular research question and to a wider view to different research disciplines and how they utilize their state-of-the-art techniques in demonstrating potential use cases across different scales. 2021-02-11T21:44:09Z 2021-02-11T21:44:09Z 2019-01-23 14:53:42 2018 book 31953 16648714 9782889455430 https://directory.doabooks.org/handle/20.500.12854/55296 eng Frontiers Research Topics image/jpeg Attribution 4.0 International https://www.frontiersin.org/research-topics/5475/optical-approaches-to-capture-plant-dynamics-in-time-space-and-across-scales Frontiers Media SA 10.3389/978-2-88945-543-0 10.3389/978-2-88945-543-0 bf5ce210-e72e-4860-ba9b-c305640ff3ae 9782889455430 173 open access
spellingShingle QK1-989
Q1-390
computational plant science
plant dynamics
photogrammetry
phenotyping
temporal imaging
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PST Botany and plant sciences
Alexander Bucksch
Norbert Pfeifer
Eetu Puttonen
András Zlinszky
Optical Approaches to Capture Plant Dynamics in Time, Space, and Across Scales
title Optical Approaches to Capture Plant Dynamics in Time, Space, and Across Scales
title_full Optical Approaches to Capture Plant Dynamics in Time, Space, and Across Scales
title_fullStr Optical Approaches to Capture Plant Dynamics in Time, Space, and Across Scales
title_full_unstemmed Optical Approaches to Capture Plant Dynamics in Time, Space, and Across Scales
title_short Optical Approaches to Capture Plant Dynamics in Time, Space, and Across Scales
title_sort optical approaches to capture plant dynamics in time space and across scales
topic QK1-989
Q1-390
computational plant science
plant dynamics
photogrammetry
phenotyping
temporal imaging
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PST Botany and plant sciences
topic_facet QK1-989
Q1-390
computational plant science
plant dynamics
photogrammetry
phenotyping
temporal imaging
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PST Botany and plant sciences
url 31953
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