Fruit Metabolism and Metabolomics

Over the past ten years, metabolomics strategies have allowed the relative or absolute quantitation of metabolite levels for the study of various biological questions in plant sciences. For fruit studies, in particular, they have participated in the identification of the genes underpinning fruit dev...

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description Over the past ten years, metabolomics strategies have allowed the relative or absolute quantitation of metabolite levels for the study of various biological questions in plant sciences. For fruit studies, in particular, they have participated in the identification of the genes underpinning fruit development and ripening. This book proposes examples of the current use of metabolomics studies of fruit for basic research or practical applications. It includes articles about several tropical and temperate fruit species. The studies concern fruit biochemical phenotyping, fruit metabolism during development and after harvest, including primary and specialized metabolisms, or bioactive compounds involved in fruit growth and environmental responses. The analytical strategies used are based mostly on liquid or gas chromatography coupled with mass spectrometry, but also on nuclear magnetic resonance and near-infrared spectroscopy. The effect of genotype, stages of development, or fruit tissue type on metabolomic profiles and corresponding metabolism regulations are addressed for fruit metabolism studies. The interest in combining other omics with metabolomics is also exemplified.
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publisherStr MDPI - Multidisciplinary Digital Publishing Institute
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spelling doab-20.500.12854ir-692062024-03-28T03:33:54Z Fruit Metabolism and Metabolomics Moing, Annick Osorio, Sonia Pétriacq, Pierre Anacardium occidentale fast phenotyping NIR UPLC-HRMS chemometrics Capsicum frutescens L. non-targeted metabolomics secondary metabolism Liquid Chromatography coupled to Mass Spectrometry (LC-MS) mulberry high resolution mass spectrometry antioxidant activity in vitro gastrointestinal digestion α-glucosidase inhibitory activity cytokinin fruit expansion kiwifruit phytohormone tomato metabolomics biochemical phenotyping priming BABA Botrytis cinerea Phytophthora infestans Pseudomonas syringae fruit pigmentation introgression lines mass spectrometry San Marzano landrace Davidson’s plum finger lime native pepperberry antioxidant amino acids GC×GC-TOFMS UHPLC-QqQ-TOF-MS/MS bush fruit genetic resources melon genotype by sequencing elemental analysis metabolome Cucumis melo pineapple ripening non-climacteric lipophilic compounds lipid-related genes lipid metabolism fruit postharvest quality traits stress biomarkers polyphenolics solanaceous crops capsicum annuum pepper eggplant fruit ripening tissue-specificity flavonoid wine clones Vitis vinifera sensory analysis fruit metabolomics developmental metabolomics stress metabolomics spatial metabolomics central metabolism specialized metabolism nuclear magnetic resonance spectroscopy omics multi-omics integration thema EDItEUR::G Reference, Information and Interdisciplinary subjects::GP Research and information: general thema EDItEUR::P Mathematics and Science::PS Biology, life sciences Over the past ten years, metabolomics strategies have allowed the relative or absolute quantitation of metabolite levels for the study of various biological questions in plant sciences. For fruit studies, in particular, they have participated in the identification of the genes underpinning fruit development and ripening. This book proposes examples of the current use of metabolomics studies of fruit for basic research or practical applications. It includes articles about several tropical and temperate fruit species. The studies concern fruit biochemical phenotyping, fruit metabolism during development and after harvest, including primary and specialized metabolisms, or bioactive compounds involved in fruit growth and environmental responses. The analytical strategies used are based mostly on liquid or gas chromatography coupled with mass spectrometry, but also on nuclear magnetic resonance and near-infrared spectroscopy. The effect of genotype, stages of development, or fruit tissue type on metabolomic profiles and corresponding metabolism regulations are addressed for fruit metabolism studies. The interest in combining other omics with metabolomics is also exemplified. 2021-05-01T15:43:45Z 2021-05-01T15:43:45Z 2020 book ONIX_20210501_9783039430147_952 9783039430147 9783039430154 https://directory.doabooks.org/handle/20.500.12854/69206 eng application/octet-stream Attribution 4.0 International https://mdpi.com/books/pdfview/book/2978 https://mdpi.com/books/pdfview/book/2978 MDPI - Multidisciplinary Digital Publishing Institute 10.3390/books978-3-03943-015-4 10.3390/books978-3-03943-015-4 46cabcaa-dd94-4bfe-87b4-55023c1b36d0 9783039430147 9783039430154 266 Basel, Switzerland open access
spellingShingle Anacardium occidentale
fast phenotyping
NIR
UPLC-HRMS
chemometrics
Capsicum frutescens L.
non-targeted metabolomics
secondary metabolism
Liquid Chromatography coupled to Mass Spectrometry (LC-MS)
mulberry
high resolution mass spectrometry
antioxidant activity
in vitro gastrointestinal digestion
α-glucosidase inhibitory activity
cytokinin
fruit expansion
kiwifruit
phytohormone
tomato
metabolomics
biochemical phenotyping
priming
BABA
Botrytis cinerea
Phytophthora infestans
Pseudomonas syringae
fruit pigmentation
introgression lines
mass spectrometry
San Marzano landrace
Davidson’s plum
finger lime
native pepperberry
antioxidant
amino acids
GC×GC-TOFMS
UHPLC-QqQ-TOF-MS/MS
bush fruit
genetic resources
melon
genotype by sequencing
elemental analysis
metabolome
Cucumis melo
pineapple
ripening
non-climacteric
lipophilic compounds
lipid-related genes
lipid metabolism
fruit
postharvest
quality traits
stress
biomarkers
polyphenolics
solanaceous crops
capsicum annuum
pepper
eggplant
fruit ripening
tissue-specificity
flavonoid
wine
clones
Vitis vinifera
sensory analysis
fruit metabolomics
developmental metabolomics
stress metabolomics
spatial metabolomics
central metabolism
specialized metabolism
nuclear magnetic resonance spectroscopy
omics
multi-omics integration
thema EDItEUR::G Reference, Information and Interdisciplinary subjects::GP Research and information: general
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences
Fruit Metabolism and Metabolomics
title Fruit Metabolism and Metabolomics
title_full Fruit Metabolism and Metabolomics
title_fullStr Fruit Metabolism and Metabolomics
title_full_unstemmed Fruit Metabolism and Metabolomics
title_short Fruit Metabolism and Metabolomics
title_sort fruit metabolism and metabolomics
topic Anacardium occidentale
fast phenotyping
NIR
UPLC-HRMS
chemometrics
Capsicum frutescens L.
non-targeted metabolomics
secondary metabolism
Liquid Chromatography coupled to Mass Spectrometry (LC-MS)
mulberry
high resolution mass spectrometry
antioxidant activity
in vitro gastrointestinal digestion
α-glucosidase inhibitory activity
cytokinin
fruit expansion
kiwifruit
phytohormone
tomato
metabolomics
biochemical phenotyping
priming
BABA
Botrytis cinerea
Phytophthora infestans
Pseudomonas syringae
fruit pigmentation
introgression lines
mass spectrometry
San Marzano landrace
Davidson’s plum
finger lime
native pepperberry
antioxidant
amino acids
GC×GC-TOFMS
UHPLC-QqQ-TOF-MS/MS
bush fruit
genetic resources
melon
genotype by sequencing
elemental analysis
metabolome
Cucumis melo
pineapple
ripening
non-climacteric
lipophilic compounds
lipid-related genes
lipid metabolism
fruit
postharvest
quality traits
stress
biomarkers
polyphenolics
solanaceous crops
capsicum annuum
pepper
eggplant
fruit ripening
tissue-specificity
flavonoid
wine
clones
Vitis vinifera
sensory analysis
fruit metabolomics
developmental metabolomics
stress metabolomics
spatial metabolomics
central metabolism
specialized metabolism
nuclear magnetic resonance spectroscopy
omics
multi-omics integration
thema EDItEUR::G Reference, Information and Interdisciplinary subjects::GP Research and information: general
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences
topic_facet Anacardium occidentale
fast phenotyping
NIR
UPLC-HRMS
chemometrics
Capsicum frutescens L.
non-targeted metabolomics
secondary metabolism
Liquid Chromatography coupled to Mass Spectrometry (LC-MS)
mulberry
high resolution mass spectrometry
antioxidant activity
in vitro gastrointestinal digestion
α-glucosidase inhibitory activity
cytokinin
fruit expansion
kiwifruit
phytohormone
tomato
metabolomics
biochemical phenotyping
priming
BABA
Botrytis cinerea
Phytophthora infestans
Pseudomonas syringae
fruit pigmentation
introgression lines
mass spectrometry
San Marzano landrace
Davidson’s plum
finger lime
native pepperberry
antioxidant
amino acids
GC×GC-TOFMS
UHPLC-QqQ-TOF-MS/MS
bush fruit
genetic resources
melon
genotype by sequencing
elemental analysis
metabolome
Cucumis melo
pineapple
ripening
non-climacteric
lipophilic compounds
lipid-related genes
lipid metabolism
fruit
postharvest
quality traits
stress
biomarkers
polyphenolics
solanaceous crops
capsicum annuum
pepper
eggplant
fruit ripening
tissue-specificity
flavonoid
wine
clones
Vitis vinifera
sensory analysis
fruit metabolomics
developmental metabolomics
stress metabolomics
spatial metabolomics
central metabolism
specialized metabolism
nuclear magnetic resonance spectroscopy
omics
multi-omics integration
thema EDItEUR::G Reference, Information and Interdisciplinary subjects::GP Research and information: general
thema EDItEUR::P Mathematics and Science::PS Biology, life sciences
url ONIX_20210501_9783039430147_952