Computational Approaches: Drug Discovery and Design in Medicinal Chemistry and Bioinformatics

This book is a collection of original research articles in the field of computer-aided drug design. It reports the use of current and validated computational approaches applied to drug discovery as well as the development of new computational tools to identify new and more potent drugs.

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collection Directory of Open Access Books
description This book is a collection of original research articles in the field of computer-aided drug design. It reports the use of current and validated computational approaches applied to drug discovery as well as the development of new computational tools to identify new and more potent drugs.
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language eng
publishDate 2022
publishDateRange 2022
publishDateSort 2022
publisher MDPI - Multidisciplinary Digital Publishing Institute
publisherStr MDPI - Multidisciplinary Digital Publishing Institute
record_format ojs
spelling doab-20.500.12854ir-762582024-03-28T03:32:59Z Computational Approaches: Drug Discovery and Design in Medicinal Chemistry and Bioinformatics Tutone, Marco Almerico, Anna Maria 3D-QSAR pharmacophore modeling ligand-based model HDACs isoform-selective histone deacetylase inhibitors aminophenylbenzamide hERG toxicity drug discovery fingerprints machine learning deep learning gene expression signature drug repositioning approaches RNA expression regulation high-throughput virtual screening dual-target lead discovery neurodegenerative disorders Alzheimer’s disease dual mode of action multi-modal nicotinic acetylcholine receptor acetylcholinesterase molecular docking methotrexate drug resistance human dihydrofolate reductase virtual screening molecular dynamics simulation. epitope binning epitope mapping epitope prediction antibody:antigen interactions protein docking glycoprotein D (gD) herpes simplex virus fusion proteins Src inhibitors pharmacophore model molecular dynamics simulations in silico COX-2 inhibitors molecular modeling sodium–glucose co-transporters 2 FimH uropathogenic bacteria urinary tract infections diabetes drug-resistance mutations HIV-2 protease structural characterization induced structural deformations SARS-CoV-2 COVID-19 multiprotein inhibiting natural compounds MD simulation 3CL-Pro antivirals docking simulations drug repurposing consensus models binding space isomeric space MRP4 SNPs variants protein threading modeling molecular dynamics binding site hTSPO PK11195 cholesterol homology modeling molecular dynamics (MD) simulation carbon nanotubes Stone–Wales defects haeckelite defects doxorubicin encapsulation drug delivery system binding free energies noncovalent interactions main protease mutants inhibitors PF-00835231 Mycobacterium tuberculosis tuberculosis proteasome natural compounds multiscale multitargeting polypharmacology computational biology drug repositioning structural bioinformatics proteomic signature skin aging oxidative stress aging progression mechanism genome-wide genetic and epigenetic network (GWGEN) systems medicine design multiple-molecule drug immunoproteasome non-covalent inhibitors MD binding metadynamics induced-fit docking n/a thema EDItEUR::G Reference, Information and Interdisciplinary subjects::GP Research and information: general thema EDItEUR::P Mathematics and Science::PN Chemistry This book is a collection of original research articles in the field of computer-aided drug design. It reports the use of current and validated computational approaches applied to drug discovery as well as the development of new computational tools to identify new and more potent drugs. 2022-01-11T13:22:21Z 2022-01-11T13:22:21Z 2021 book ONIX_20220111_9783036527796_1002 9783036527796 9783036527789 https://directory.doabooks.org/handle/20.500.12854/76258 eng image/jpeg Attribution 4.0 International https://mdpi.com/books/pdfview/book/4789 https://mdpi.com/books/pdfview/book/4789 MDPI - Multidisciplinary Digital Publishing Institute 10.3390/books978-3-0365-2778-9 10.3390/books978-3-0365-2778-9 46cabcaa-dd94-4bfe-87b4-55023c1b36d0 9783036527796 9783036527789 387 Basel, Switzerland open access
spellingShingle 3D-QSAR
pharmacophore modeling
ligand-based model
HDACs
isoform-selective histone deacetylase inhibitors
aminophenylbenzamide
hERG toxicity
drug discovery
fingerprints
machine learning
deep learning
gene expression signature
drug repositioning approaches
RNA expression regulation
high-throughput virtual screening
dual-target lead discovery
neurodegenerative disorders
Alzheimer’s disease
dual mode of action
multi-modal
nicotinic acetylcholine receptor
acetylcholinesterase
molecular docking
methotrexate
drug resistance
human dihydrofolate reductase
virtual screening
molecular dynamics simulation.
epitope binning
epitope mapping
epitope prediction
antibody:antigen interactions
protein docking
glycoprotein D (gD)
herpes simplex virus fusion proteins
Src inhibitors
pharmacophore model
molecular dynamics simulations
in silico
COX-2 inhibitors
molecular modeling
sodium–glucose co-transporters 2
FimH
uropathogenic bacteria
urinary tract infections
diabetes
drug-resistance mutations
HIV-2 protease
structural characterization
induced structural deformations
SARS-CoV-2
COVID-19
multiprotein inhibiting natural compounds
MD simulation
3CL-Pro
antivirals
docking simulations
drug repurposing
consensus models
binding space
isomeric space
MRP4
SNPs
variants
protein threading modeling
molecular dynamics
binding site
hTSPO
PK11195
cholesterol
homology modeling
molecular dynamics (MD) simulation
carbon nanotubes
Stone–Wales defects
haeckelite defects
doxorubicin encapsulation
drug delivery system
binding free energies
noncovalent interactions
main protease
mutants
inhibitors
PF-00835231
Mycobacterium tuberculosis
tuberculosis
proteasome
natural compounds
multiscale
multitargeting
polypharmacology
computational biology
drug repositioning
structural bioinformatics
proteomic signature
skin aging
oxidative stress
aging progression mechanism
genome-wide genetic and epigenetic network (GWGEN)
systems medicine design
multiple-molecule drug
immunoproteasome
non-covalent inhibitors
MD binding
metadynamics
induced-fit docking
n/a
thema EDItEUR::G Reference, Information and Interdisciplinary subjects::GP Research and information: general
thema EDItEUR::P Mathematics and Science::PN Chemistry
Computational Approaches: Drug Discovery and Design in Medicinal Chemistry and Bioinformatics
title Computational Approaches: Drug Discovery and Design in Medicinal Chemistry and Bioinformatics
title_full Computational Approaches: Drug Discovery and Design in Medicinal Chemistry and Bioinformatics
title_fullStr Computational Approaches: Drug Discovery and Design in Medicinal Chemistry and Bioinformatics
title_full_unstemmed Computational Approaches: Drug Discovery and Design in Medicinal Chemistry and Bioinformatics
title_short Computational Approaches: Drug Discovery and Design in Medicinal Chemistry and Bioinformatics
title_sort computational approaches drug discovery and design in medicinal chemistry and bioinformatics
topic 3D-QSAR
pharmacophore modeling
ligand-based model
HDACs
isoform-selective histone deacetylase inhibitors
aminophenylbenzamide
hERG toxicity
drug discovery
fingerprints
machine learning
deep learning
gene expression signature
drug repositioning approaches
RNA expression regulation
high-throughput virtual screening
dual-target lead discovery
neurodegenerative disorders
Alzheimer’s disease
dual mode of action
multi-modal
nicotinic acetylcholine receptor
acetylcholinesterase
molecular docking
methotrexate
drug resistance
human dihydrofolate reductase
virtual screening
molecular dynamics simulation.
epitope binning
epitope mapping
epitope prediction
antibody:antigen interactions
protein docking
glycoprotein D (gD)
herpes simplex virus fusion proteins
Src inhibitors
pharmacophore model
molecular dynamics simulations
in silico
COX-2 inhibitors
molecular modeling
sodium–glucose co-transporters 2
FimH
uropathogenic bacteria
urinary tract infections
diabetes
drug-resistance mutations
HIV-2 protease
structural characterization
induced structural deformations
SARS-CoV-2
COVID-19
multiprotein inhibiting natural compounds
MD simulation
3CL-Pro
antivirals
docking simulations
drug repurposing
consensus models
binding space
isomeric space
MRP4
SNPs
variants
protein threading modeling
molecular dynamics
binding site
hTSPO
PK11195
cholesterol
homology modeling
molecular dynamics (MD) simulation
carbon nanotubes
Stone–Wales defects
haeckelite defects
doxorubicin encapsulation
drug delivery system
binding free energies
noncovalent interactions
main protease
mutants
inhibitors
PF-00835231
Mycobacterium tuberculosis
tuberculosis
proteasome
natural compounds
multiscale
multitargeting
polypharmacology
computational biology
drug repositioning
structural bioinformatics
proteomic signature
skin aging
oxidative stress
aging progression mechanism
genome-wide genetic and epigenetic network (GWGEN)
systems medicine design
multiple-molecule drug
immunoproteasome
non-covalent inhibitors
MD binding
metadynamics
induced-fit docking
n/a
thema EDItEUR::G Reference, Information and Interdisciplinary subjects::GP Research and information: general
thema EDItEUR::P Mathematics and Science::PN Chemistry
topic_facet 3D-QSAR
pharmacophore modeling
ligand-based model
HDACs
isoform-selective histone deacetylase inhibitors
aminophenylbenzamide
hERG toxicity
drug discovery
fingerprints
machine learning
deep learning
gene expression signature
drug repositioning approaches
RNA expression regulation
high-throughput virtual screening
dual-target lead discovery
neurodegenerative disorders
Alzheimer’s disease
dual mode of action
multi-modal
nicotinic acetylcholine receptor
acetylcholinesterase
molecular docking
methotrexate
drug resistance
human dihydrofolate reductase
virtual screening
molecular dynamics simulation.
epitope binning
epitope mapping
epitope prediction
antibody:antigen interactions
protein docking
glycoprotein D (gD)
herpes simplex virus fusion proteins
Src inhibitors
pharmacophore model
molecular dynamics simulations
in silico
COX-2 inhibitors
molecular modeling
sodium–glucose co-transporters 2
FimH
uropathogenic bacteria
urinary tract infections
diabetes
drug-resistance mutations
HIV-2 protease
structural characterization
induced structural deformations
SARS-CoV-2
COVID-19
multiprotein inhibiting natural compounds
MD simulation
3CL-Pro
antivirals
docking simulations
drug repurposing
consensus models
binding space
isomeric space
MRP4
SNPs
variants
protein threading modeling
molecular dynamics
binding site
hTSPO
PK11195
cholesterol
homology modeling
molecular dynamics (MD) simulation
carbon nanotubes
Stone–Wales defects
haeckelite defects
doxorubicin encapsulation
drug delivery system
binding free energies
noncovalent interactions
main protease
mutants
inhibitors
PF-00835231
Mycobacterium tuberculosis
tuberculosis
proteasome
natural compounds
multiscale
multitargeting
polypharmacology
computational biology
drug repositioning
structural bioinformatics
proteomic signature
skin aging
oxidative stress
aging progression mechanism
genome-wide genetic and epigenetic network (GWGEN)
systems medicine design
multiple-molecule drug
immunoproteasome
non-covalent inhibitors
MD binding
metadynamics
induced-fit docking
n/a
thema EDItEUR::G Reference, Information and Interdisciplinary subjects::GP Research and information: general
thema EDItEUR::P Mathematics and Science::PN Chemistry
url ONIX_20220111_9783036527796_1002