Transcriptome and Genome Analyses Applied to Aquaculture Research

Aquaculture is an important economic activity for food production all around the world that has experienced an exponential growth during the last few decades. However, several weaknesses and bottlenecks still need to be addressed in order to improve the aquaculture productive system. The recent fast...

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Bibliografiske detaljer
Format:	Online
Sprog:	engelsk
Udgivet:	MDPI - Multidisciplinary Digital Publishing Institute 2022
Fag:	RNA-Seq lncRNAs Dicentrarchus labrax viral infection nodavirus immune response fish T lymphocytes infection malnutrition inflammation aquaculture histopathology immunohistochemistry enteromyxosis Philasterides dicentrarchi turbot transcriptomics Chinese mitten crab Eriocheir sinensis transportome transporters salinity osmoregulation transcriptome meta-analysis gills short pentraxins c-reactive protein zebrafish transcript expression antiviral SVCV rag1 mutants skin mucosal immunity hypoxia hypo-metabolic state growth swimming performance metabolic landmarks muscle transcriptome glycolysis lipid metabolism protein turnover gilthead sea bream hepatopancreas necrosis disease metatranscriptomics sequencing hepatopancreatic flora teleost B cells single cell transcriptomics immunoglobulins immune markers transcription factors long non-coding RNAs hepatic transcript expression salmon microarray omega-6/omega-3 ratio nutrigenomics fatty acids liver muscle Misgurnus anguillicaudatus sexual size dimorphism polyploid size dimorphism comparative transcriptome gene expression edible red sea urchin Loxechinus albus RNA-seq reference transcriptome Chinese soft-shelled turtle Aeromonas hydrophila hemorrhagic sepsis molecular immunopathogenesis tripartite motif proteins B30.2 domain antiviral immunity Ctenopharyngodon idella grass carp reovirus metamorphosis brain RNA sequencing intermuscular bone development Megalobrama amblycephala Oreochromis niloticus histological structure Atlantic salmon smoltification genome mRNAs miRNAs sox family genes Pelodiscus sinensis estradiol pseudo-female sex-related heterosis heterobeltiosis environment transgressive genes conserved miRNA high-throughput sequencing lumpfish novel miRNA RT-qPCR heat shock protein co-chaperon network salinity-alkalinity adaptation molecular evolution Lateolabrax maculatus genomics stress response HPI-axis neuroendocrine-immune interaction common carp poly-unsaturated fatty acid fatty acid elongase association study genomic selection bulked segregant analysis SNP association analysis joint effect seawater adaptation microRNAs small-RNA sequencing microarray transcriptome European seabass chronic inflammation opioid receptors immune status whole-transcriptome sequencing sex differentiation non-coding RNAs ceRNA red cusk-eel thermal stress liver transcriptome oxidative damage protein folding hepatic enzymes n/a thema EDItEUR::G Reference, Information and Interdisciplinary subjects::GP Research and information: general thema EDItEUR::P Mathematics and Science::PS Biology, life sciences thema EDItEUR::K Economics, Finance, Business and Management::KN Industry and industrial studies::KNA Agribusiness and primary industries::KNAF Fisheries and related industries
Online adgang:	ONIX_20221206_9783036559223_88
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Summary:	Aquaculture is an important economic activity for food production all around the world that has experienced an exponential growth during the last few decades. However, several weaknesses and bottlenecks still need to be addressed in order to improve the aquaculture productive system. The recent fast development of the omics technologies has provided scientists with meaningful tools to elucidate the molecular basis of their research interests. This reprint compiles different works about the use of transcriptomics and genomics technologies in different aspects of the aquaculture research, such as immunity, stress response, development, sexual dimorphism, among others, in a variety of fish and shellfish, and even in turtles. Different transcriptome (mRNAs and non-coding RNAs (ncRNAs)), genome (Single Nucleotide Polymorphisms (SNPs)), and metatranscriptome analyses were conducted to unravel those different aspects of interest.

Transcriptome and Genome Analyses Applied to Aquaculture Research

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