Spectroscopic, Thermodynamic and Molecular Docking Studies on Molecular Mechanisms of Drug Binding to Proteins

This reprint contains several articles where the molecular mechanisms and structural changes in target proteins on interaction with various viruses and bacteria were studied. In addition, drug-protein interactions, drug–drug interaction mechanisms, anti-Glycating, antioxidant, binding affinity, netw...

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יצא לאור: MDPI - Multidisciplinary Digital Publishing Institute 2023
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collection Directory of Open Access Books
description This reprint contains several articles where the molecular mechanisms and structural changes in target proteins on interaction with various viruses and bacteria were studied. In addition, drug-protein interactions, drug–drug interaction mechanisms, anti-Glycating, antioxidant, binding affinity, network pharmacology-driven investigations, and targeted anticancer treatments were also investigated.
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id doab-20.500.12854ir-96629
institution Directory of Open Access Books
language eng
publishDate 2023
publishDateRange 2023
publishDateSort 2023
publisher MDPI - Multidisciplinary Digital Publishing Institute
publisherStr MDPI - Multidisciplinary Digital Publishing Institute
record_format ojs
spelling doab-20.500.12854ir-966292024-03-31T13:08:13Z Spectroscopic, Thermodynamic and Molecular Docking Studies on Molecular Mechanisms of Drug Binding to Proteins Wani, Tanveer A. Zargar, Seema Hussain, Afzal RSV ectodomain G protein heparan sulfate protein–ligand interaction fluorescence quenching molecular docking molecular dynamic simulation quercetin CCL4 neurotoxicity VirtualToxLab oxidative stress markers Huperzine A molecular dynamics simulation fluorescence spectroscopy human serum albumin neurodegenerative disorders drug–protein interactions erlotinib bovine serum albumin binding interaction competition hepatitis E virus methyltransferase protein stability enzyme assay garlic antioxidant anti-glycation glycation AGEs HSA quetiapine hydrophobic interaction thermodynamic parameters seproxetine antidepressant charge transfer π-acceptors DFT haloperidol antipsychotics keratoconus MMP-2 MMP-9 molecular dynamics MM-GBSA calculations pharmacophore mapping α-amylase advanced glycation end-products caffeic acid coumaric acid coronary artery disease phytotherapy network pharmacology angiogenesis zebrafish dynamics molecular docking NEK7 virtual screening DFTs deep learning drug design drug repurposing structural-based cancer A. aspera β-amyrin C. gigantea C. procera GC-MS Minimum inhibitory concentration (MIC) Molecular docking MD simulations Tuberculosis (TB) n/a thema EDItEUR::M Medicine and Nursing thema EDItEUR::M Medicine and Nursing::MK Medical specialties, branches of medicine::MKG Pharmacology This reprint contains several articles where the molecular mechanisms and structural changes in target proteins on interaction with various viruses and bacteria were studied. In addition, drug-protein interactions, drug–drug interaction mechanisms, anti-Glycating, antioxidant, binding affinity, network pharmacology-driven investigations, and targeted anticancer treatments were also investigated. 2023-02-02T16:27:15Z 2023-02-02T16:27:15Z 2023 book ONIX_20230202_9783036562261_30 9783036562261 9783036562254 https://directory.doabooks.org/handle/20.500.12854/96629 eng image/jpeg Attribution 4.0 International https://mdpi.com/books/pdfview/book/6574 https://mdpi.com/books/pdfview/book/6574 MDPI - Multidisciplinary Digital Publishing Institute 10.3390/books978-3-0365-6225-4 10.3390/books978-3-0365-6225-4 46cabcaa-dd94-4bfe-87b4-55023c1b36d0 9783036562261 9783036562254 276 Basel open access
spellingShingle RSV
ectodomain G protein
heparan sulfate
protein–ligand interaction
fluorescence quenching
molecular docking
molecular dynamic simulation
quercetin
CCL4
neurotoxicity
VirtualToxLab
oxidative stress markers
Huperzine A
molecular dynamics simulation
fluorescence spectroscopy
human serum albumin
neurodegenerative disorders
drug–protein interactions
erlotinib
bovine serum albumin
binding interaction
competition
hepatitis E virus
methyltransferase
protein stability
enzyme assay
garlic
antioxidant
anti-glycation
glycation
AGEs
HSA
quetiapine
hydrophobic interaction
thermodynamic parameters
seproxetine
antidepressant
charge transfer
π-acceptors
DFT
haloperidol
antipsychotics
keratoconus
MMP-2
MMP-9
molecular dynamics
MM-GBSA calculations
pharmacophore mapping
α-amylase
advanced glycation end-products
caffeic acid
coumaric acid
coronary artery disease
phytotherapy
network pharmacology
angiogenesis
zebrafish
dynamics molecular docking
NEK7
virtual screening
DFTs
deep learning
drug design
drug repurposing
structural-based
cancer
A. aspera
β-amyrin
C. gigantea
C. procera
GC-MS
Minimum inhibitory concentration (MIC)
Molecular docking
MD simulations
Tuberculosis (TB)
n/a
thema EDItEUR::M Medicine and Nursing
thema EDItEUR::M Medicine and Nursing::MK Medical specialties, branches of medicine::MKG Pharmacology
Spectroscopic, Thermodynamic and Molecular Docking Studies on Molecular Mechanisms of Drug Binding to Proteins
title Spectroscopic, Thermodynamic and Molecular Docking Studies on Molecular Mechanisms of Drug Binding to Proteins
title_full Spectroscopic, Thermodynamic and Molecular Docking Studies on Molecular Mechanisms of Drug Binding to Proteins
title_fullStr Spectroscopic, Thermodynamic and Molecular Docking Studies on Molecular Mechanisms of Drug Binding to Proteins
title_full_unstemmed Spectroscopic, Thermodynamic and Molecular Docking Studies on Molecular Mechanisms of Drug Binding to Proteins
title_short Spectroscopic, Thermodynamic and Molecular Docking Studies on Molecular Mechanisms of Drug Binding to Proteins
title_sort spectroscopic thermodynamic and molecular docking studies on molecular mechanisms of drug binding to proteins
topic RSV
ectodomain G protein
heparan sulfate
protein–ligand interaction
fluorescence quenching
molecular docking
molecular dynamic simulation
quercetin
CCL4
neurotoxicity
VirtualToxLab
oxidative stress markers
Huperzine A
molecular dynamics simulation
fluorescence spectroscopy
human serum albumin
neurodegenerative disorders
drug–protein interactions
erlotinib
bovine serum albumin
binding interaction
competition
hepatitis E virus
methyltransferase
protein stability
enzyme assay
garlic
antioxidant
anti-glycation
glycation
AGEs
HSA
quetiapine
hydrophobic interaction
thermodynamic parameters
seproxetine
antidepressant
charge transfer
π-acceptors
DFT
haloperidol
antipsychotics
keratoconus
MMP-2
MMP-9
molecular dynamics
MM-GBSA calculations
pharmacophore mapping
α-amylase
advanced glycation end-products
caffeic acid
coumaric acid
coronary artery disease
phytotherapy
network pharmacology
angiogenesis
zebrafish
dynamics molecular docking
NEK7
virtual screening
DFTs
deep learning
drug design
drug repurposing
structural-based
cancer
A. aspera
β-amyrin
C. gigantea
C. procera
GC-MS
Minimum inhibitory concentration (MIC)
Molecular docking
MD simulations
Tuberculosis (TB)
n/a
thema EDItEUR::M Medicine and Nursing
thema EDItEUR::M Medicine and Nursing::MK Medical specialties, branches of medicine::MKG Pharmacology
topic_facet RSV
ectodomain G protein
heparan sulfate
protein–ligand interaction
fluorescence quenching
molecular docking
molecular dynamic simulation
quercetin
CCL4
neurotoxicity
VirtualToxLab
oxidative stress markers
Huperzine A
molecular dynamics simulation
fluorescence spectroscopy
human serum albumin
neurodegenerative disorders
drug–protein interactions
erlotinib
bovine serum albumin
binding interaction
competition
hepatitis E virus
methyltransferase
protein stability
enzyme assay
garlic
antioxidant
anti-glycation
glycation
AGEs
HSA
quetiapine
hydrophobic interaction
thermodynamic parameters
seproxetine
antidepressant
charge transfer
π-acceptors
DFT
haloperidol
antipsychotics
keratoconus
MMP-2
MMP-9
molecular dynamics
MM-GBSA calculations
pharmacophore mapping
α-amylase
advanced glycation end-products
caffeic acid
coumaric acid
coronary artery disease
phytotherapy
network pharmacology
angiogenesis
zebrafish
dynamics molecular docking
NEK7
virtual screening
DFTs
deep learning
drug design
drug repurposing
structural-based
cancer
A. aspera
β-amyrin
C. gigantea
C. procera
GC-MS
Minimum inhibitory concentration (MIC)
Molecular docking
MD simulations
Tuberculosis (TB)
n/a
thema EDItEUR::M Medicine and Nursing
thema EDItEUR::M Medicine and Nursing::MK Medical specialties, branches of medicine::MKG Pharmacology
url ONIX_20230202_9783036562261_30