What SARS-CoV-2 Variants Have Taught Us: Evolutionary Challenges of RNA Viruses

RNA viruses have a rapid pace of evolutionary change. Mutations in RNA viral genomes occur at a pace that greatly exceeds that observed in other organisms and determine much of their evolutionary “behavior”. For instance, RNA viruses have a great ability to cross species barriers and, hence, emergin...

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Publicado: MDPI - Multidisciplinary Digital Publishing Institute 2024
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Acceso en liña:ONIX_20240514_9783036598314_456
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collection Directory of Open Access Books
description RNA viruses have a rapid pace of evolutionary change. Mutations in RNA viral genomes occur at a pace that greatly exceeds that observed in other organisms and determine much of their evolutionary “behavior”. For instance, RNA viruses have a great ability to cross species barriers and, hence, emerging new human and animal viruses. Indeed, emerging RNA viruses are currently the biggest health threat to humankind to emerge in a very long time. Thus, it is crucial at this time to shed some light on how the evolutionary behavior of RNA viruses shapes their epidemiolocal, fitness, and pathological features. This will contribute toward a better understanding of how to deal with these threats.
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language eng
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publisher MDPI - Multidisciplinary Digital Publishing Institute
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spelling doab-20.500.12854ir-1378602024-05-14T14:44:52Z What SARS-CoV-2 Variants Have Taught Us: Evolutionary Challenges of RNA Viruses El-Shamy, Ahmed Ibrahim, Mohamed COVID-19 Omicron sub-lineages Ecuador SARS-CoV-2 variants pseudovirus neutralization assay convalescent plasma SARS-CoV-2 chicken passive immunization antibodies neutralizing antibodies egg BA.2 BA.5 symptoms Germany impact variant of concern phylogenetic analysis nucleocapsid protein localization antibody therapy severe acute respiratory syndrome coronavirus 2 high-resolution melting Omicron subvariant F486V mutation evolution receptor binding domain T-cell epitope spike protein drug B.1.620 R.1 cell entry neutralization antibody evasion ACE2 binding molecular modeling mutation analysis nucleotide diversity RNA secondary structure VOCs variants infection control spike protein RBD heparin pentosan polysulfate mucopolysaccharide polysulfate omicron delta immunocompromised host hospitalization RNA virus quasispecies mutation recombination coronavirus virus adaptation persistent infection N-terminal domain LRRC15 leucine rich repeat containing 15 neuropilin-1 NRP-1 mutations RNA viruses host immunity adaptation viral escape Omicron: sub-lineages transmission and infection disease severity peptide microarray humoral immunity IgA IgG epitope mapping SARS-CoV-2 variant pandemic vaccine antiviral HIV-1 MERS-CoV monkeypox virus influenza virus lipid raft ganglioside electrostatic surface potential South America dynamics BA.1 BA.4 vaccines booster vaccines doses effectiveness COVID-19-related disease SARS CoV-2 antibody VOC RT-qPCR surveillance n/a thema EDItEUR::P Mathematics and Science::PB Mathematics::PBW Applied mathematics RNA viruses have a rapid pace of evolutionary change. Mutations in RNA viral genomes occur at a pace that greatly exceeds that observed in other organisms and determine much of their evolutionary “behavior”. For instance, RNA viruses have a great ability to cross species barriers and, hence, emerging new human and animal viruses. Indeed, emerging RNA viruses are currently the biggest health threat to humankind to emerge in a very long time. Thus, it is crucial at this time to shed some light on how the evolutionary behavior of RNA viruses shapes their epidemiolocal, fitness, and pathological features. This will contribute toward a better understanding of how to deal with these threats. 2024-05-14T14:44:45Z 2024-05-14T14:44:45Z 2024 book ONIX_20240514_9783036598314_456 9783036598314 9783036598321 https://directory.doabooks.org/handle/20.500.12854/137860 eng application/octet-stream Attribution-NonCommercial-NoDerivatives 4.0 International https://mdpi.com/books/pdfview/book/9100 https://mdpi.com/books/pdfview/book/9100 MDPI - Multidisciplinary Digital Publishing Institute 10.3390/books978-3-0365-9832-1 10.3390/books978-3-0365-9832-1 46cabcaa-dd94-4bfe-87b4-55023c1b36d0 9783036598314 9783036598321 366 open access
spellingShingle COVID-19
Omicron
sub-lineages
Ecuador
SARS-CoV-2 variants
pseudovirus
neutralization assay
convalescent plasma
SARS-CoV-2
chicken
passive immunization
antibodies
neutralizing antibodies
egg
BA.2
BA.5
symptoms
Germany
impact
variant of concern
phylogenetic analysis
nucleocapsid
protein localization
antibody therapy
severe acute respiratory syndrome coronavirus 2
high-resolution melting
Omicron subvariant
F486V mutation
evolution
receptor binding domain
T-cell epitope
spike protein
drug
B.1.620
R.1
cell entry
neutralization
antibody evasion
ACE2 binding
molecular modeling
mutation analysis
nucleotide diversity
RNA secondary structure
VOCs
variants
infection control
spike protein RBD
heparin
pentosan polysulfate
mucopolysaccharide polysulfate
omicron
delta
immunocompromised host
hospitalization
RNA virus
quasispecies
mutation
recombination
coronavirus
virus adaptation
persistent infection
N-terminal domain
LRRC15
leucine rich repeat containing 15
neuropilin-1
NRP-1
mutations
RNA viruses
host immunity
adaptation
viral escape
Omicron: sub-lineages
transmission and infection
disease severity
peptide microarray
humoral immunity
IgA
IgG
epitope mapping
SARS-CoV-2 variant
pandemic
vaccine
antiviral
HIV-1
MERS-CoV
monkeypox virus
influenza virus
lipid raft
ganglioside
electrostatic surface potential
South America
dynamics
BA.1
BA.4
vaccines
booster vaccines doses
effectiveness
COVID-19-related disease
SARS CoV-2 antibody
VOC
RT-qPCR
surveillance
n/a
thema EDItEUR::P Mathematics and Science::PB Mathematics::PBW Applied mathematics
What SARS-CoV-2 Variants Have Taught Us: Evolutionary Challenges of RNA Viruses
title What SARS-CoV-2 Variants Have Taught Us: Evolutionary Challenges of RNA Viruses
title_full What SARS-CoV-2 Variants Have Taught Us: Evolutionary Challenges of RNA Viruses
title_fullStr What SARS-CoV-2 Variants Have Taught Us: Evolutionary Challenges of RNA Viruses
title_full_unstemmed What SARS-CoV-2 Variants Have Taught Us: Evolutionary Challenges of RNA Viruses
title_short What SARS-CoV-2 Variants Have Taught Us: Evolutionary Challenges of RNA Viruses
title_sort what sars cov 2 variants have taught us evolutionary challenges of rna viruses
topic COVID-19
Omicron
sub-lineages
Ecuador
SARS-CoV-2 variants
pseudovirus
neutralization assay
convalescent plasma
SARS-CoV-2
chicken
passive immunization
antibodies
neutralizing antibodies
egg
BA.2
BA.5
symptoms
Germany
impact
variant of concern
phylogenetic analysis
nucleocapsid
protein localization
antibody therapy
severe acute respiratory syndrome coronavirus 2
high-resolution melting
Omicron subvariant
F486V mutation
evolution
receptor binding domain
T-cell epitope
spike protein
drug
B.1.620
R.1
cell entry
neutralization
antibody evasion
ACE2 binding
molecular modeling
mutation analysis
nucleotide diversity
RNA secondary structure
VOCs
variants
infection control
spike protein RBD
heparin
pentosan polysulfate
mucopolysaccharide polysulfate
omicron
delta
immunocompromised host
hospitalization
RNA virus
quasispecies
mutation
recombination
coronavirus
virus adaptation
persistent infection
N-terminal domain
LRRC15
leucine rich repeat containing 15
neuropilin-1
NRP-1
mutations
RNA viruses
host immunity
adaptation
viral escape
Omicron: sub-lineages
transmission and infection
disease severity
peptide microarray
humoral immunity
IgA
IgG
epitope mapping
SARS-CoV-2 variant
pandemic
vaccine
antiviral
HIV-1
MERS-CoV
monkeypox virus
influenza virus
lipid raft
ganglioside
electrostatic surface potential
South America
dynamics
BA.1
BA.4
vaccines
booster vaccines doses
effectiveness
COVID-19-related disease
SARS CoV-2 antibody
VOC
RT-qPCR
surveillance
n/a
thema EDItEUR::P Mathematics and Science::PB Mathematics::PBW Applied mathematics
topic_facet COVID-19
Omicron
sub-lineages
Ecuador
SARS-CoV-2 variants
pseudovirus
neutralization assay
convalescent plasma
SARS-CoV-2
chicken
passive immunization
antibodies
neutralizing antibodies
egg
BA.2
BA.5
symptoms
Germany
impact
variant of concern
phylogenetic analysis
nucleocapsid
protein localization
antibody therapy
severe acute respiratory syndrome coronavirus 2
high-resolution melting
Omicron subvariant
F486V mutation
evolution
receptor binding domain
T-cell epitope
spike protein
drug
B.1.620
R.1
cell entry
neutralization
antibody evasion
ACE2 binding
molecular modeling
mutation analysis
nucleotide diversity
RNA secondary structure
VOCs
variants
infection control
spike protein RBD
heparin
pentosan polysulfate
mucopolysaccharide polysulfate
omicron
delta
immunocompromised host
hospitalization
RNA virus
quasispecies
mutation
recombination
coronavirus
virus adaptation
persistent infection
N-terminal domain
LRRC15
leucine rich repeat containing 15
neuropilin-1
NRP-1
mutations
RNA viruses
host immunity
adaptation
viral escape
Omicron: sub-lineages
transmission and infection
disease severity
peptide microarray
humoral immunity
IgA
IgG
epitope mapping
SARS-CoV-2 variant
pandemic
vaccine
antiviral
HIV-1
MERS-CoV
monkeypox virus
influenza virus
lipid raft
ganglioside
electrostatic surface potential
South America
dynamics
BA.1
BA.4
vaccines
booster vaccines doses
effectiveness
COVID-19-related disease
SARS CoV-2 antibody
VOC
RT-qPCR
surveillance
n/a
thema EDItEUR::P Mathematics and Science::PB Mathematics::PBW Applied mathematics
url ONIX_20240514_9783036598314_456